PoplarV1, Main, Exploration, bibRecord, 003D39

Protease gene families in Populus and Arabidopsis.

Identifieur interne : 003D39 ( Main/Exploration ); précédent : 003D38; suivant : 003D40

Protease gene families in Populus and Arabidopsis.

Auteurs : Maribel García-Lorenzo [Suède] ; Andreas Sjödin ; Stefan Jansson ; Christiane Funk

Source :

BMC plant biology [ 1471-2229 ] ; 2006.

RBID : pubmed:17181860

Descripteurs français

KwdFr :
- ARN messager (métabolisme), Analyse de regroupements (MeSH), Arabidopsis (croissance et développement), Arabidopsis (enzymologie), Arabidopsis (génétique), Bases de données génétiques (MeSH), Famille multigénique (MeSH), Génome végétal (MeSH), Peptide hydrolases (classification), Peptide hydrolases (composition chimique), Peptide hydrolases (génétique), Phylogenèse (MeSH), Populus (croissance et développement), Populus (enzymologie), Populus (génétique), Protéines d'Arabidopsis (classification), Protéines d'Arabidopsis (composition chimique), Protéines d'Arabidopsis (génétique), Protéines végétales (classification), Protéines végétales (composition chimique), Protéines végétales (génétique), Similitude de séquences d'acides nucléiques (MeSH).
MESH :
- classification : Peptide hydrolases, Protéines d'Arabidopsis, Protéines végétales.
- composition chimique : Peptide hydrolases, Protéines d'Arabidopsis, Protéines végétales.
- croissance et développement : Arabidopsis, Populus.
- enzymologie : Arabidopsis, Populus.
- génétique : Arabidopsis, Peptide hydrolases, Populus, Protéines d'Arabidopsis, Protéines végétales.
- métabolisme : ARN messager.
- Analyse de regroupements, Bases de données génétiques, Famille multigénique, Génome végétal, Phylogenèse, Similitude de séquences d'acides nucléiques.

English descriptors

KwdEn :
- Arabidopsis (enzymology), Arabidopsis (genetics), Arabidopsis (growth & development), Arabidopsis Proteins (chemistry), Arabidopsis Proteins (classification), Arabidopsis Proteins (genetics), Cluster Analysis (MeSH), Databases, Genetic (MeSH), Genome, Plant (MeSH), Multigene Family (MeSH), Peptide Hydrolases (chemistry), Peptide Hydrolases (classification), Peptide Hydrolases (genetics), Phylogeny (MeSH), Plant Proteins (chemistry), Plant Proteins (classification), Plant Proteins (genetics), Populus (enzymology), Populus (genetics), Populus (growth & development), RNA, Messenger (metabolism), Sequence Homology, Nucleic Acid (MeSH).
MESH :
- chemical , chemistry : Arabidopsis Proteins, Peptide Hydrolases, Plant Proteins.
- chemical , classification : Arabidopsis Proteins, Peptide Hydrolases, Plant Proteins.
- enzymology : Arabidopsis, Populus.
- genetics : Arabidopsis, Arabidopsis Proteins, Peptide Hydrolases, Plant Proteins, Populus.
- growth & development : Arabidopsis, Populus.
- chemical , metabolism : RNA, Messenger.
- Cluster Analysis, Databases, Genetic, Genome, Plant, Multigene Family, Phylogeny, Sequence Homology, Nucleic Acid.

Abstract

BACKGROUND

Proteases play key roles in plants, maintaining strict protein quality control and degrading specific sets of proteins in response to diverse environmental and developmental stimuli. Similarities and differences between the proteases expressed in different species may give valuable insights into their physiological roles and evolution.

RESULTS

We have performed a comparative analysis of protease genes in the two sequenced dicot genomes, Arabidopsis thaliana and Populus trichocarpa by using genes coding for proteases in the MEROPS database 1 for Arabidopsis to identify homologous sequences in Populus. A multigene-based phylogenetic analysis was performed. Most protease families were found to be larger in Populus than in Arabidopsis, reflecting recent genome duplication. Detailed studies on e.g. the DegP, Clp, FtsH, Lon, rhomboid and papain-Like protease families showed the pattern of gene family expansion and gene loss was complex. We finally show that different Populus tissues express unique suites of protease genes and that the mRNA levels of different classes of proteases change along a developmental gradient.

CONCLUSION

Recent gene family expansion and contractions have made the Arabidopsis and Populus complements of proteases different and this, together with expression patterns, gives indications about the roles of the individual gene products or groups of proteases.

DOI: 10.1186/1471-2229-6-30
PubMed: 17181860
PubMed Central: PMC1780054

Affiliations:

Suède

Links toward previous steps (curation, corpus...)

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Le document en format XML

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<front><div type="abstract" xml:lang="en"><p><b>BACKGROUND</b>
</p>
<p>Proteases play key roles in plants, maintaining strict protein quality control and degrading specific sets of proteins in response to diverse environmental and developmental stimuli. Similarities and differences between the proteases expressed in different species may give valuable insights into their physiological roles and evolution.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>RESULTS</b>
</p>
<p>We have performed a comparative analysis of protease genes in the two sequenced dicot genomes, Arabidopsis thaliana and Populus trichocarpa by using genes coding for proteases in the MEROPS database 1 for Arabidopsis to identify homologous sequences in Populus. A multigene-based phylogenetic analysis was performed. Most protease families were found to be larger in Populus than in Arabidopsis, reflecting recent genome duplication. Detailed studies on e.g. the DegP, Clp, FtsH, Lon, rhomboid and papain-Like protease families showed the pattern of gene family expansion and gene loss was complex. We finally show that different Populus tissues express unique suites of protease genes and that the mRNA levels of different classes of proteases change along a developmental gradient.</p>
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<div type="abstract" xml:lang="en"><p><b>CONCLUSION</b>
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<p>Recent gene family expansion and contractions have made the Arabidopsis and Populus complements of proteases different and this, together with expression patterns, gives indications about the roles of the individual gene products or groups of proteases.</p>
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<ReferenceList><Reference><Citation>Eur J Biochem. 2004 Nov;271(22):4361-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15560777</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Eur J Biochem. 2004 Dec;271(23-24):4865-71</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15606774</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2005 Feb;41(3):364-75</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15659096</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2005 Jan;56(411):357-63</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15545296</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Biol. 2005;6(4):R34</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15833121</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Mol Biol. 2005 Sep;59(2):239-52</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16247555</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2006 Jan 1;34(Database issue):D270-2</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16381862</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Plant Biol. 2006;57:599-621</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16669775</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2006 Sep 15;313(5793):1596-604</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16973872</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2006 Dec;48(5):806-17</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17092314</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2003 Nov;133(3):1190-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14563929</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>In Silico Biol. 1999-2000;1(4):197-213</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11479934</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 2001 Oct 19;107(2):161-71</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11672524</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 2001 Oct 19;107(2):173-82</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11672525</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2001 Dec;127(4):1626-34</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11743107</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2001 Dec;17(12):1244-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11751241</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Biol Chem. 2002 Jan 18;277(3):2006-11</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11717304</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Biol Chem. 2002 Mar 8;277(10):8354-65</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11719511</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2002 Apr;53(370):927-37</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11912235</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Cell. 2002 Mar;9(3):673-83</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11931773</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genes Cells. 2002 Aug;7(8):769-80</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12167156</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Structure. 2002 Aug;10(8):1073-83</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12176385</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Curr Genet. 2002 Aug;41(5):291-310</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12185496</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2002 Oct;130(2):857-64</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12376650</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Cell. 2002 Sep;10(3):443-55</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12408815</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Struct Biol. 2003 Jan;141(1):77-83</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12576022</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Biol Chem. 2003 Feb 28;278(9):6862-72</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12482876</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Biotechniques. 2003 Feb;34(2):374-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12613259</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Biol. 2003;4(3):R19</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12620104</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2003 Sep;15(9):2152-64</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12953117</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2003 Oct;15(10):2308-19</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14507998</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Bacteriol. 1989 Mar;171(3):1574-84</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2537822</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Gene. 1993 Jul 30;129(2):175-82</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8325504</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 1995 Dec 22;270(5244):1986-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8592746</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>EMBO J. 1996 Aug 15;15(16):4218-29</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8861950</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 1997 Jun;9(6):957-65</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9212469</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Mol Biol. 1999 Sep;41(2):195-206</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10579487</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2000 Mar;12(3):419-31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10715327</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2003 Dec;15(12):2843-55</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14630971</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2004 Jan 1;32(Database issue):D142-4</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14681379</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Biol Chem. 2004 Jan 2;279(1):421-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14561759</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Phytochemistry. 2004 Jan;65(1):43-58</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14697270</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2004 Jan;16(1):241-56</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14671022</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Trends Plant Sci. 2004 Jan;9(1):49-56</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14729219</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Biol Chem. 2004 Feb 27;279(9):8140-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14665623</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Rev Mol Cell Biol. 2004 Mar;5(3):188-97</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14990999</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Biol. 2004;5(4):R24</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15059257</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Theor Appl Genet. 2004 Jun;109(1):10-22</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15085260</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2004 Sep;136(1):2621-32</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15375207</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2004 Sep 21;101(38):13951-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15353603</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Trends Plant Sci. 2004 Oct;9(10):469-72</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15465679</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Bacteriol. 2000 Jun;182(11):3259-65</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10809708</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Mol Biol. 2000 Oct;44(3):399-415</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11199397</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>EMBO J. 2001 Feb 15;20(4):713-22</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11179216</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2001 Apr;125(4):1912-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11299370</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 1997 Nov 14;91(4):447-56</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9390554</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 1997 Dec 15;25(24):4876-82</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9396791</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Biol Chem. 1998 Mar 20;273(12):7094-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9507020</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Planta. 1998 Dec;207(2):286-95</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9951729</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 1999 Mar;11(3):431-44</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10072402</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 1999 Apr 30;97(3):339-47</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10319814</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Microbiol. 1999 May;32(3):449-58</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10320569</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell Physiol. 1999 May;40(5):504-14</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10427773</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 1999 Sep 28;96(20):11033-40</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10500119</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2005 Jul;167(1):165-70</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15948839</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Microbiol. 2005;59:211-31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15910274</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2005 Aug;138(4):1957-66</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16040665</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2005 Sep 20;102(38):13699-704</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16157880</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2005 Oct;17(10):2782-90</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16126834</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEBS Lett. 2005 Oct 24;579(25):5723-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16223493</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
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Protease gene families in Populus and Arabidopsis.

Protease gene families in Populus and Arabidopsis.

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